GA03 RNAseq_基因表現量分析:

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GASystemChannel

－GA03 基因表現量分析 (coming soon)

Demo_code : download


Environment requirement

  • Hardware :CPU : 10 cores
    RAM : 45G
  • Software :The pipeline is developed based on GA System. All software used in the pipeline are included in pre-defined software environments (GA application collection ). Please install suitable environment before start the pipeline(How to do it!) .


The diagram of workflow



Reference

Homo_sapiensPathSource
GRCh38en94Star2.7.5aArchiveGRCh38 Release 94
GRCh38en102Star2.7.5aArchiveGRCh38 Release 102
GRCh38en104Star2.7.5a/staging/reserve/GAResource/GA_bundle/Ref/Homo_sapiens/GRCh38en104Star2.7.5aGRCh38 Release 104
Mus_musculusPathSource
GRCm38en101Star2.7.5aArchiveGRCm38 Release 101
GRCm39en104Star2.7.5a/staging/reserve/GAResource/GA_bundle/Ref/Mus_musculus/GRCm39en104Star2.7.5aGRCm39 Release 104


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